Basic Information
Locus ID:
gene-LOC132645987
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Alpha/beta hydrolase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 121020173 | 121026555 | - | gene-LOC132645987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 35,691.82 Da | 32.39 | 78.50 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00561 | alpha/beta hydrolase fold | 25 | 148 | 2.3E-21 | IPR000073 |
| SUPERFAMILY | SSF53474 | alpha/beta-Hydrolases | 2 | 313 | 1.96E-67 | IPR029058 |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 1 | 314 | 9.8E-103 | IPR029058 |
| PRINTS | PR00412 | Epoxide hydrolase signature | 111 | 124 | 2.3E-41 | IPR000639 |
| PRINTS | PR00412 | Epoxide hydrolase signature | 51 | 66 | 2.3E-41 | IPR000639 |
| PRINTS | PR00412 | Epoxide hydrolase signature | 97 | 110 | 2.3E-41 | IPR000639 |
| PRINTS | PR00412 | Epoxide hydrolase signature | 288 | 310 | 2.3E-41 | IPR000639 |
| PRINTS | PR00412 | Epoxide hydrolase signature | 31 | 49 | 2.3E-41 | IPR000639 |
| PRINTS | PR00412 | Epoxide hydrolase signature | 248 | 264 | 2.3E-41 | IPR000639 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko00590 (Arachidonic acid metabolism)
map00590 (Arachidonic acid metabolism)
ko00625 (Chloroalkane and chloroalkene degradation)
map00625 (Chloroalkane and chloroalkene degradation)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko04146 (Peroxisome)
map04146 (Peroxisome)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05600.1 | alpha/beta-Hydrolases superfamily protein. | 0 |
| RefSeq | XP_009629075.1 | epoxide hydrolase A-like [Nicotiana tomentosiformis] | 0 |
| P0DO70 | Epoxide hydrolase 3 OS=Siraitia grosvenorii OX=190515 GN=EPH3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4DF45 | bifunctional epoxide hydrolase 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107829145 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology