Basic Information
Locus ID:
gene-LOC132645493
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 111544574 | 111551320 | - | gene-LOC132645493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 62,789.03 Da | 54.83 | 73.11 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 142 | 221 | 4.28891E-15 | - |
| Pfam | PF00651 | BTB/POZ domain | 139 | 235 | 1.0E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 261 | 354 | 2.1E-11 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 135 | 235 | 3.22E-14 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 437 | 548 | 5.23E-8 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 127 | 273 | 1.6E-18 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 424 | 549 | 8.5E-6 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 274 | 376 | 9.3E-16 | - |
| SMART | SM00225 | BTB_4 | 138 | 238 | 3.7E-10 | IPR000210 |
| SMART | SM00875 | BACK_2 | 253 | 355 | 1.6E-10 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 138 | 207 | 14.418399 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_016538140.1 | BTB/POZ domain-containing protein POB1 [Capsicum annuum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G3BST0 | BTB/POZ domain-containing protein OS=Capsicum chinense OX=80379 GN=BC332_21401 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology