Basic Information
Locus ID:
gene-LOC132645386
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 109203211 | 109204884 | - | gene-LOC132645386 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 49,227.09 Da | 36.66 | 83.93 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 278 | 323 | 9.3E-11 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 27 | 209 | 4.7E-54 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 277 | 336 | 4.06E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 270 | 338 | 2.7E-16 | IPR036638 |
| SMART | SM00353 | finulus | 280 | 329 | 2.1E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 274 | 323 | 16.875536 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 364 | - | - |
| Coils | Coil | Coil | 313 | 340 | - | - |
| Coils | Coil | Coil | 436 | 445 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_049350683.1 | transcription factor MYC1-like [Solanum verrucosum] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B2N5 | BHLH domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019238 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology