Basic Information
Locus ID:
gene-LOC132645298
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 107296868 | 107300476 | - | gene-LOC132645298 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 26,767.93 Da | 33.45 | 69.30 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 19 | 234 | 7.5E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 122 | 224 | 6.21E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 120 | 237 | 1.2E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 125 | 225 | 22.290531 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 91 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_049352152.1 | auxin-responsive protein IAA16 [Solanum verrucosum] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | M1BPS3 | Auxin-responsive protein OS=Solanum tuberosum OX=4113 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology