Basic Information
Locus ID:
gene-LOC132645272
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
NEK1
Description:
Kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 106722787 | 106735753 | + | gene-LOC132645272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 68,586.07 Da | 54.61 | 79.09 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 2.37065E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 1.4E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 325 | 5.4E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 9.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 271 | 2.1E-55 | - |
| SMART | SM00220 | serkin_6 | 4 | 258 | 5.0E-81 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 258 | 44.753204 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 543 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_049351413.1 | serine/threonine-protein kinase Nek2 [Solanum verrucosum] | 0 |
| Q9SLI2 | Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana OX=3702 GN=NEK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2G2W7A8 | Serine/threonine-protein kinase Nek1 OS=Capsicum baccatum OX=33114 GN=CQW23_19951 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology