Basic Information
Locus ID:
gene-LOC132644902
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
fiber protein Fb15
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 152819147 | 152825048 | + | gene-LOC132644902 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 9,826.44 Da | 45.74 | 91.86 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30010.1 | 0 | |
| RefSeq | XP_016556344.1 | uncharacterized protein LOC107855850 [Capsicum annuum] | 0 |
| TrEMBL | A0A2G3C8B2 | Fiber protein Fb15 OS=Capsicum chinense OX=80379 GN=BC332_16173 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah013311, Ah022138 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g062820 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg58854, Sbi_jg63754 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23135 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00013010 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000005705 |
| Amaranthaceae | Chenopodium quinoa | 7 | CQ.Regalona.r1.1BG0006170, CQ.Regalona.r1.3AG0022800 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30262790 |
| Arecaceae | Cocos nucifera | 2 | contig69078992G000010, contig69315729G000010 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103705182, gene-LOC103711646, gene-LOC120105013 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.3533.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G29355 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G30010.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10026677m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g27810.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g084380.2N, BniB03g011140.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1423 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g04690 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g05610 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2443 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00037945 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.537, BH07.664, CH07.543 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0103350, gene-QOZ80_2BG0156670 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0570470.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco03G003750, Oco04G003710 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g07910.2 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G055800 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G034190, Chr15G025430 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G315600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG021530, gene_TRIDC6BG027250 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G153900.1.cds1, TraesCS6B02G181600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb233510_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-29839, nbis-gene-55025 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12281, Zma_g15038 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g26700 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13274 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3693 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16712 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.197 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16570 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14679 |
| Salicaceae | Populus euphratica | 2 | populus_peu05835, populus_peu11202 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132633596, gene-LOC132644902 |
| Solanaceae | Solanum chilense | 1 | SOLCI005093400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107023893 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_16736 |
| Zosteraceae | Zostera marina | 1 | Zosma01g04420.v3.1 |