Basic Information
Locus ID:
gene-LOC132644829
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 152779808 | 152790586 | + | gene-LOC132644829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 81,729.72 Da | 43.93 | 84.09 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 443 | 707 | 9.7E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 161 | 220 | 1.2E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 48 | 87 | 5.2E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 418 | 708 | 8.59E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 73 | 258 | 4.81E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 271 | 2.4E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 517 | 3.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 731 | 2.6E-51 | - |
| SMART | SM00369 | LRR_typ_2 | 207 | 229 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 159 | 182 | 4.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 206 | 37.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 440 | 717 | 33.841755 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 290 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_049363418.1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like [Solanum verrucosum] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4CEC1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107818088 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology