Basic Information
Locus ID:
gene-LOC132644365
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 151532116 | 151535525 | - | gene-LOC132644365 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 68,226.61 Da | 37.90 | 98.05 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 60 | 3.4E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 90 | 149 | 1.1E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 355 | 607 | 2.9E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 609 | 3.51E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 209 | 5.1E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 219 | 1.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 134 | 4.2E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 615 | 1.0E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 319 | 424 | 5.5E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 351 | 615 | 26.57688 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 162 | 184 | 7.342321 | IPR001611 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_016542385.2 | probable inactive receptor kinase RLK902 [Capsicum annuum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XR57 | Putative inactive receptor kinase OS=Capsicum baccatum OX=33114 GN=CQW23_02302 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology