Basic Information
Locus ID:
gene-LOC132644127
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
malic enzyme
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 84508132 | 84509036 | - | gene-LOC132644127 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 16,205.03 Da | 66.50 | 117.01 | 0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Pathway:
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko00710 (Carbon fixation by Calvin cycle)
map00710 (Carbon fixation by Calvin cycle)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_009586797.1 | classical arabinogalactan protein 25-like [Nicotiana tomentosiformis] | 0 |
| TrEMBL | A0A2G2ZNC1 | Classical arabinogalactan protein 26-like OS=Capsicum annuum OX=4072 GN=T459_11930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg11216, jg27980, jg5695 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000006214 |
| Apiaceae | Apium graveolens | 1 | Ag11G03092 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103711748 |
| Asteraceae | Flaveria trinervia | 1 | FtriNA17387 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G47930.1, AT5G18690.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10001715m.g.v1.0, Thhalv10015003m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g29850.v2.2, Sp6g25650.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g044030.2N, BniS05187g200.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq06G1617, Ceq09G1221 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G1678 |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno02g01290, gene.Cymno03g13190, gene.Cymno05g04940 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate05g12170, gene.Thate06g23030 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.269 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00008202, Pov_00022483 |
| Poaceae | Echinochloa crus-galli | 2 | AH02.4461, BH02.4510 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0096010 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0316640.1.CDS1 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g71170.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G398300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600755 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G001400, Chr05G033150, Chr05G033260, Chr08G018490 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G760100 |
| Poaceae | Triticum aestivum | 1 | TraesCS3D02G470000.1.cds1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-28201 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g11905, Zma_g11906, Zma_g9350 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG03.774, evm.TU.LG04.2182, evm.TU.LG06.124 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g32300 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.533 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-11432 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7734 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-11533, nbisL1-mrna-538 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7529 |
| Salicaceae | Populus euphratica | 1 | populus_peu31202 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132608389, gene-LOC132627514, gene-LOC132644127 |
| Solanaceae | Solanum chilense | 3 | SOLCI002256400, SOLCI003725200, SOLCI004831400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029508 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.815_chr01_- |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G0241, TC12G1555 |
| Zosteraceae | Zostera marina | 1 | Zosma02g25520.v3.1 |