Basic Information
Locus ID:
gene-LOC132644022
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 59339085 | 59348279 | - | gene-LOC132644022 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 63,218.95 Da | 46.22 | 80.04 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 16 | 270 | 1.11371E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 16 | 269 | 3.3E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 307 | 3.51E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 98 | 426 | 8.5E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 95 | 7.5E-22 | - |
| SMART | SM00220 | serkin_6 | 16 | 270 | 4.5E-85 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 270 | 46.463417 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 45 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 404 | - | - |
| Coils | Coil | Coil | 322 | 342 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_009589283.1 | serine/threonine-protein kinase Nek6 isoform X1 [Nicotiana tomentosiformis] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1S4BZS8 | serine/threonine-protein kinase Nek6-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107813646 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology