Basic Information
Locus ID:
gene-LOC132643856
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 150199861 | 150209974 | - | gene-LOC132643856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 181,400.09 Da | 43.54 | 74.55 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1321 | 1580 | 1.79342E-128 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 185 | 449 | 1.63309E-97 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 186 | 445 | 2.9E-21 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1359 | 1524 | 5.3E-36 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1527 | 1578 | 1.9E-8 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1290 | 1580 | 1.18E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 248 | 416 | 3.4E-24 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1442 | 1581 | 9.4E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1286 | 1439 | 2.1E-35 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 247 | 416 | 1.1E-31 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1293 | 1581 | 1.4E-92 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1261 | 1580 | 57.529236 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 948 | 967 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1604 | 1630 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_016554957.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Capsicum annuum] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A2G2WKK7 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Capsicum baccatum OX=33114 GN=CQW23_14910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology