Basic Information
Locus ID:
gene-LOC132643786
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 149982926 | 149996023 | + | gene-LOC132643786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 109,522.96 Da | 58.59 | 59.83 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 746 | 790 | 4.58446E-4 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 26 | 249 | 2.21E-9 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 738 | 792 | 3.2E-8 | - |
| SMART | SM00333 | TUDOR_7 | 741 | 799 | 3.1E-5 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 696 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 1006 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 657 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 954 | 999 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 884 | 898 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 687 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 899 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 809 | 859 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 868 | 883 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_049360228.1 | sister chromatid cohesion protein PDS5 homolog C-like [Solanum verrucosum] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0V0IX77 | Putative microtubule-associated protein futsch-like OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology