Basic Information
Locus ID:
gene-LOC132642770
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 134605803 | 134610403 | - | gene-LOC132642770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 68,797.57 Da | 45.33 | 87.24 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 31 | 98 | 4.6E-13 | IPR025287 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 109 | 198 | 1.4E-6 | IPR032872 |
| Pfam | PF00069 | Protein kinase domain | 303 | 565 | 5.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 568 | 5.66E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 375 | 4.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 577 | 1.1E-46 | - |
| SMART | SM00220 | serkin_6 | 300 | 569 | 5.2E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 581 | 35.679176 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 306 | 338 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 418 | 430 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66930.2 | - | 0 |
| RefSeq | XP_024934308.2 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [Ziziphus jujuba var. spinosa] | 0 |
| F4HQ23 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.7 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.7 PE=3 SV=3 | 0 | |
| TrEMBL | A0A6P6GJR1 | non-specific serine/threonine protein kinase OS=Ziziphus jujuba OX=326968 GN=LOC112493224 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-LOC132642770.