Basic Information
Locus ID:
gene-LOC132642694
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 125627054 | 125629537 | - | gene-LOC132642694 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 52,802.84 Da | 42.81 | 100.85 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 56 | 3.3E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 82 | 6.02E-12 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 122 | 311 | 3.91E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 93 | 364 | 2.8E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 57 | 2.8E-8 | - |
| SMART | SM00256 | fbox_2 | 22 | 62 | 1.8E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 64 | 10.822189 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049365949.1 | uncharacterized protein LOC125830817 [Solanum verrucosum] | 0 |
| TrEMBL | A0A6N2AZM3 | F-box domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019584 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132642694 |
| Solanaceae | Solanum chilense | 1 | SOLCI005516500 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107019930, gene-LOC114077224 |