HalophFGD

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Basic Information
Locus ID: gene-LOC132642651
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: domain in FBox and BRCT domain containing plant proteins
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 118044816 118046677 - gene-LOC132642651
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.28 28,295.96 Da 35.00 103.77 0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52058 L domain-like 97 240 3.74E-5 -
SUPERFAMILY SSF81383 F-box domain 15 63 3.01E-9 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_009598476.1 F-box/FBD/LRR-repeat protein At1g13570-like isoform X3 [Nicotiana tomentosiformis] 0
TrEMBL A0A1S4DPC4 F-box/FBD/LRR-repeat protein At1g13570-like OS=Nicotiana tabacum OX=4097 GN=LOC107831998 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Salicaceae Populus euphratica 1 populus_peu17759
Solanaceae Lycium barbarum 8 gene-LOC132601437, gene-LOC132628337, gene-LOC132628338 ...
gene-LOC132630257, gene-LOC132640169, gene-LOC132641237, gene-LOC132642201, gene-LOC132642651
Solanaceae Solanum pennellii 2 gene-LOC107020257, gene-LOC107020267
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.