Basic Information
Locus ID:
gene-LOC132642378
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 21761628 | 21764546 | - | gene-LOC132642378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 43,495.29 Da | 40.76 | 83.73 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 98 | 354 | 1.3E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 364 | 8.78E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 367 | 1.3E-24 | - |
| SMART | SM00220 | serkin_6 | 25 | 354 | 1.0E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 354 | 19.608818 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_016574664.2 | serine/threonine-protein kinase BLUS1-like [Capsicum annuum] | 0 |
| Q9JM52 | Misshapen-like kinase 1 OS=Mus musculus OX=10090 GN=Mink1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2G3CGI8 | Protein kinase domain-containing protein OS=Capsicum chinense OX=80379 GN=BC332_13563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg18682, jg1869, jg8331 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30003640 |
| Apiaceae | Apium graveolens | 2 | Ag2G02557, AgUnG00499 |
| Solanaceae | Lycium barbarum | 5 | gene-LOC132613084, gene-LOC132613089, gene-LOC132613094 ... |
| Solanaceae | Solanum chilense | 5 | SOLCI000552200, SOLCI001268300, SOLCI001371800 ... |
| Solanaceae | Solanum pennellii | 7 | gene-LOC107019742, gene-LOC107032678, gene-LOC107032679 ... |