Basic Information
Locus ID:
gene-LOC132642347
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
PRK1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 18011824 | 18017277 | - | gene-LOC132642347 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 78,757.86 Da | 38.43 | 85.33 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 74 | 117 | 5.8E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 176 | 229 | 1.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 398 | 664 | 8.7E-26 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 89 | 262 | 8.5E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 666 | 1.68E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 367 | 469 | 1.3E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 282 | 1.7E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 75 | 192 | 2.9E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 687 | 1.8E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 679 | 24.682924 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 422 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 337 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07040.1 | Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | 0 |
| RefSeq | XP_009618438.1 | pollen receptor-like kinase 2 [Nicotiana tomentosiformis] | 0 |
| Q84JQ4 | Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4CH32 | pollen receptor-like kinase 2 OS=Nicotiana tabacum OX=4097 GN=LOC107818920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology