HalophFGD

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Basic Information
Locus ID: gene-LOC132642201
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: F-box FBD LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 3369397 3372320 + gene-LOC132642201
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.08 36,578.40 Da 43.46 106.34 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52047 RNI-like 32 268 1.41E-10 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 17 297 3.2E-7 IPR032675
SMART SM00579 9598neu4hmm 241 310 3.7E-6 IPR006566
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047260875.1 F-box/FBD/LRR-repeat protein At1g13570-like [Capsicum annuum] 0
TrEMBL A0A2G2ZKG0 F-box/FBD/LRR-repeat protein At1g13570-like OS=Capsicum annuum OX=4072 GN=LOC107871332 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Salicaceae Populus euphratica 1 populus_peu17759
Solanaceae Lycium barbarum 8 gene-LOC132601437, gene-LOC132628337, gene-LOC132628338 ...
gene-LOC132630257, gene-LOC132640169, gene-LOC132641237, gene-LOC132642201, gene-LOC132642651
Solanaceae Solanum pennellii 2 gene-LOC107020257, gene-LOC107020267
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.