Basic Information
Locus ID:
gene-LOC132642012
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
WRKY4
Description:
WRKY transcription factor 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 142303694 | 142309703 | + | gene-LOC132642012 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 55,214.58 Da | 62.93 | 57.70 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 391 | 448 | 1.3E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 216 | 271 | 8.5E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 213 | 274 | 4.05E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 382 | 450 | 7.45E-30 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 375 | 451 | 6.0E-37 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 206 | 274 | 1.2E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 390 | 449 | 5.7E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 215 | 273 | 9.0E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 210 | 274 | 23.685972 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 385 | 450 | 39.157509 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 470 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_049404057.1 | probable WRKY transcription factor 4 [Solanum stenotomum] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3Q7GET7 | WRKY transcription factor 3 OS=Solanum lycopersicum OX=4081 GN=101253782 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology