Basic Information
Locus ID:
gene-LOC132641911
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 140235621 | 140245962 | - | gene-LOC132641911 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 90,829.19 Da | 44.67 | 79.21 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 94 | 290 | 2.71426E-101 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 267 | 1.0E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 272 | 770 | 1.4E-193 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 343 | 601 | 4.63E-91 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 623 | 744 | 2.88E-33 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 300 | 1.83E-62 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 73 | 315 | 1.5E-92 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 605 | 748 | 2.3E-52 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 519 | 604 | 6.8E-33 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 341 | 518 | 4.8E-75 | - |
| SMART | SM00387 | HKATPase_4 | 107 | 269 | 2.5E-5 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 51 | 789 | 2.0E-240 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 105 | 114 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 294 | 2.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 173 | 190 | 2.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 202 | 224 | 2.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 257 | 274 | 2.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 155 | 172 | 2.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 105 | 2.4E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 106 | 128 | 2.4E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 82 | 745 | 26.365686 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 788 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_049364909.1 | heat shock protein 90-5, chloroplastic [Solanum verrucosum] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | M1BQI2 | Heat shock protein 90 OS=Solanum tuberosum OX=4113 GN=102578539 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology