Basic Information
Locus ID:
gene-LOC132641876
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 139493184 | 139498103 | + | gene-LOC132641876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 69,002.52 Da | 37.47 | 94.07 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 121 | 158 | 2.3E-7 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 305 | 571 | 2.5E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 7.5E-13 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 281 | 574 | 1.73E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 195 | 1.96E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 380 | 3.4E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 593 | 1.1E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 212 | 3.2E-50 | IPR032675 |
| SMART | SM00220 | serkin_6 | 304 | 573 | 1.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 304 | 583 | 36.2304 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 310 | 333 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 123 | 136 | 8.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 168 | 181 | 8.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_016548068.2 | protein NSP-INTERACTING KINASE 2 [Capsicum annuum] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8ELI8 | Protein NSP-INTERACTING KINASE 1 OS=Capsicum annuum OX=4072 GN=T459_26934 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology