Basic Information
Locus ID:
gene-LOC132641826
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
NAC domain-containing protein 8 isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 137966378 | 137973294 | - | gene-LOC132641826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 49,342.25 Da | 48.03 | 64.44 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 57 | 196 | 2.8E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 42 | 215 | 1.28E-38 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 65 | 221 | 4.3E-30 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 56 | 215 | 31.389469 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 259 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_016548188.2 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Capsicum annuum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2V9Y8 | NAC domain-containing protein 8 (Fragment) OS=Capsicum baccatum OX=33114 GN=CQW23_30642 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology