Basic Information
Locus ID:
gene-LOC132641615
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 132533077 | 132542866 | + | gene-LOC132641615 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 180,525.91 Da | 54.98 | 74.34 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 328 | 600 | 3.37728E-132 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1337 | 1599 | 3.4203E-150 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 348 | 590 | 6.9E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1376 | 1542 | 7.5E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 394 | 566 | 2.88E-40 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 349 | 586 | 2.38E-5 | IPR027410 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1332 | 1599 | 4.51E-82 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 393 | 566 | 8.1E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1298 | 1457 | 6.5E-38 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1459 | 1600 | 2.2E-43 | - |
| SMART | SM00330 | PIPK_2 | 1314 | 1600 | 1.8E-122 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1280 | 1599 | 61.33144 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 28 | 88 | 9.133475 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1035 | 1059 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1042 | 1059 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 667 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_015076071.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Solanum pennellii] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | M1CZX5 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Solanum tuberosum OX=4113 GN=102579931 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology