Basic Information
Locus ID:
gene-LOC132641112
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 108382787 | 108387578 | - | gene-LOC132641112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 71,895.13 Da | 38.76 | 86.37 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 329 | 598 | 3.86002E-93 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 149 | 239 | 1.3E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 44 | 130 | 1.2E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 324 | 596 | 6.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 307 | 619 | 1.75E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 398 | 1.6E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 399 | 608 | 1.6E-60 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 132 | 4.6E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 142 | 242 | 1.8E-14 | IPR038408 |
| SMART | SM00220 | serkin_6 | 323 | 605 | 3.3E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 323 | 614 | 38.590778 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 137 | 242 | 14.243929 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 132 | 15.773734 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 444 | 456 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 329 | 351 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 648 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_047255629.1 | cysteine-rich receptor-like protein kinase 2 isoform X1 [Capsicum annuum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2VMT5 | Cysteine-rich receptor-like protein kinase 2 OS=Capsicum baccatum OX=33114 GN=CQW23_26091 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology