Basic Information
Locus ID:
gene-LOC132641088
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 105442425 | 105460054 | - | gene-LOC132641088 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 67,239.23 Da | 37.34 | 95.36 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 1.6E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 281 | 552 | 3.8E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 2.2E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 166 | 8.5E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 258 | 555 | 2.76E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 573 | 2.0E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 178 | 5.2E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 249 | 356 | 1.0E-34 | - |
| SMART | SM00220 | serkin_6 | 280 | 554 | 1.5E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 564 | 37.078442 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 286 | 308 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 403 | 415 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 603 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 585 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_016548009.1 | protein NSP-INTERACTING KINASE 3 isoform X1 [Capsicum annuum] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8EVT7 | protein NSP-INTERACTING KINASE 3-like isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107847918 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology