Basic Information
Locus ID:
gene-LOC132640835
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 49250663 | 49270921 | - | gene-LOC132640835 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.92 | 73,726.84 Da | 34.07 | 93.39 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 324 | 588 | 9.26932E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 321 | 584 | 1.1E-44 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 160 | 237 | 5.2E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 54 | 132 | 5.5E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 301 | 612 | 9.71E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 393 | 9.9E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 394 | 594 | 1.4E-60 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 39 | 134 | 8.2E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 240 | 1.5E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 318 | 590 | 3.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 318 | 603 | 36.414143 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 240 | 13.927106 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 134 | 13.655543 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 439 | 451 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 324 | 346 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 648 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_049404524.1 | cysteine-rich receptor-like protein kinase 42 [Solanum stenotomum] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | M1BXE1 | Kinase OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology