Basic Information
Locus ID:
gene-LOC132640814
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Possibly involved in carbohydrate binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 37171406 | 37177169 | + | gene-LOC132640814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 55,102.09 Da | 35.30 | 97.57 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 38 | 354 | 1.5E-83 | IPR000490 |
| Pfam | PF07983 | X8 domain | 372 | 443 | 3.3E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 38 | 354 | 3.91E-84 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 37 | 360 | 1.0E-115 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 365 | 457 | 1.0E-10 | - |
| SMART | SM00768 | X8_cls | 371 | 456 | 1.7E-47 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_031123646.1 | glucan endo-1,3-beta-glucosidase 3-like [Ipomoea triloba] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P6VDT5 | glucan endo-1,3-beta-glucosidase 3-like isoform X2 OS=Coffea arabica OX=13443 GN=LOC113719682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology