Basic Information
Locus ID:
gene-LOC132640476
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine-rich repeat receptor-like protein kinase TDR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 12308416 | 12314616 | + | gene-LOC132640476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 113,678.99 Da | 34.93 | 95.67 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 79 | 2.4E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 717 | 990 | 3.4E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 276 | 335 | 6.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 372 | 392 | 1.8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 133 | 188 | 2.6E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 371 | 624 | 1.36E-43 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 69 | 405 | 9.18E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 992 | 2.97E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 694 | 795 | 7.1E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 193 | 4.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 373 | 635 | 2.3E-69 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 796 | 1007 | 4.2E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 372 | 9.6E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 293 | 4.4E-27 | IPR032675 |
| SMART | SM00220 | serkin_6 | 715 | 996 | 2.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 996 | 38.661449 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 843 | 855 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_016573348.2 | leucine-rich repeat receptor-like protein kinase TDR [Capsicum annuum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2WTB9 | Leucine-rich repeat receptor-like protein kinase TDR OS=Capsicum baccatum OX=33114 GN=CQW23_12692 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology