Basic Information
Locus ID:
gene-LOC132640415
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 10509320 | 10522764 | - | gene-LOC132640415 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 73,383.33 Da | 34.24 | 94.28 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 323 | 587 | 8.94951E-93 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 55 | 132 | 6.9E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 158 | 236 | 3.7E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 320 | 584 | 1.3E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 300 | 612 | 1.89E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 276 | 392 | 3.1E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 144 | 239 | 3.3E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 40 | 134 | 5.9E-12 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 393 | 593 | 1.8E-60 | - |
| SMART | SM00220 | serkin_6 | 317 | 589 | 2.8E-32 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 239 | 13.782272 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 317 | 602 | 36.739227 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 134 | 13.791325 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 438 | 450 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 323 | 345 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 647 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_049404524.1 | cysteine-rich receptor-like protein kinase 42 [Solanum stenotomum] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | M1BXE1 | Kinase OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology