Basic Information
Locus ID:
gene-LOC132640396
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine threonine-protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 10054544 | 10057634 | - | gene-LOC132640396 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 84,206.84 Da | 39.00 | 91.83 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 476 | 758 | 3.13354E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 471 | 753 | 2.3E-43 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 63 | 259 | 7.85E-19 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 450 | 756 | 2.02E-72 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 31 | 188 | 8.2E-8 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 189 | 342 | 4.6E-15 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 431 | 550 | 2.1E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 551 | 772 | 9.5E-49 | - |
| SMART | SM00220 | serkin_6 | 470 | 760 | 9.0E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 470 | 760 | 36.442413 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 476 | 498 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 601 | 613 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 448 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_006355747.1 | PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Solanum tuberosum] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | M1CL26 | Serine/threonine-protein kinase CCR3 OS=Solanum tuberosum OX=4113 GN=102585404 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology