Basic Information
Locus ID:
gene-LOC132639949
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 142211845 | 142213422 | + | gene-LOC132639949 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 17,914.42 Da | 26.23 | 87.01 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 122 | 5.10751E-40 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 115 | 8.2E-25 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 24 | 123 | 2.01E-33 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 23 | 128 | 2.6E-35 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 25 | 124 | 35.549465 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32300.1 | uclacyanin 1. Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. | 0 |
| RefSeq | XP_016553033.1 | mavicyanin [Capsicum annuum] | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G3DBH0 | Phytocyanin domain-containing protein OS=Capsicum chinense OX=80379 GN=BC332_00396 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology