Basic Information
Locus ID:
gene-LOC132639907
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 139899585 | 139903278 | - | gene-LOC132639907 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 68,584.48 Da | 40.19 | 105.50 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 349 | 371 | 0.59 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 565 | 582 | 0.27 | IPR001611 |
| Pfam | PF00646 | F-box domain | 64 | 109 | 7.2E-7 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 480 | 502 | 0.03 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 166 | 291 | 9.22E-22 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 61 | 102 | 3.92E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 344 | 581 | 9.42E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 447 | 645 | 1.4E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 239 | 1.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 240 | 443 | 7.1E-38 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 64 | 101 | 2.2E-6 | - |
| SMART | SM00367 | LRR_CC_2 | 480 | 505 | 0.022 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 586 | 611 | 200.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 560 | 584 | 14.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 507 | 532 | 0.013 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 400 | 425 | 48.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 534 | 559 | 2.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 348 | 373 | 0.39 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 242 | 267 | 0.0016 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 161 | 189 | 210.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 216 | 241 | 8.4E-6 | IPR006553 |
| SMART | SM00256 | fbox_2 | 68 | 109 | 3.5E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 268 | 293 | 0.029 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 190 | 215 | 0.58 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 612 | 637 | 410.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 374 | 399 | 470.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 454 | 479 | 0.029 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_016574959.1 | EIN3-binding F-box protein 1 [Capsicum annuum] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8GUZ9 | EIN3-binding F-box protein 1 isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107872845 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology