HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-LOC132639673
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 118171899 118172621 - gene-LOC132639673
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.93 27,340.95 Da 25.79 90.92 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 18 162 1.1E-13 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_016567946.1 F-box/kelch-repeat protein At3g23880 [Capsicum annuum] 0
TrEMBL A0A2G2X4T5 F-box domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_06891 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_7_RagTag.1487
Solanaceae Lycium barbarum 5 gene-LOC132610589, gene-LOC132611646, gene-LOC132611647 ...
gene-LOC132611649, gene-LOC132639673
Solanaceae Solanum chilense 5 SOLCI002731400, SOLCI002982900, SOLCI003874500 ...
SOLCI005104000, SOLCI006516800
Solanaceae Solanum pennellii 4 gene-LOC107009918, gene-LOC107009922, gene-LOC107009962 ...
gene-LOC114074088
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.