HalophFGD

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Basic Information
Locus ID: gene-LOC132638386
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: Zinc finger, GRF-type
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 36895503 36897820 + gene-LOC132638386
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.92 22,567.16 Da 37.26 81.30 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF06839 GRF zinc finger 41 83 2.4E-6 IPR010666
Coils Coil Coil 130 164 - -
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_015163675.1 PREDICTED: uncharacterized protein LOC107060350 [Solanum tuberosum] 0
TrEMBL M1D977 Zinc finger, GRF-type OS=Solanum tuberosum OX=4113 GN=107060350 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Solanaceae Lycium barbarum 6 gene-LOC132602543, gene-LOC132613424, gene-LOC132619278 ...
gene-LOC132629411, gene-LOC132634081, gene-LOC132638386
Solanaceae Solanum chilense 2 SOLCI000728800, SOLCI005741500
Solanaceae Solanum pennellii 10 gene-LOC107028148, gene-LOC114075058, gene-LOC114076072 ...
gene-LOC114076117, gene-LOC114076837, gene-LOC114076875, gene-LOC114077166, gene-LOC114077323, gene-LOC114078021, gene-LOC114078671
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.