Basic Information
Locus ID:
gene-LOC132638246
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 18744619 | 18747286 | + | gene-LOC132638246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 40,722.62 Da | 32.77 | 107.50 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 88 | 351 | 5.2E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 70 | 364 | 9.58E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 44 | 158 | 3.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 360 | 2.9E-49 | - |
| SMART | SM00220 | serkin_6 | 83 | 358 | 1.2E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 83 | 358 | 31.792326 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 206 | 218 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19300.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_047266250.1 | probable receptor-like serine/threonine-protein kinase At4g34500 [Capsicum annuum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S3XU41 | probable receptor-like protein kinase At1g49730 OS=Nicotiana tabacum OX=4097 GN=LOC107768757 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23657 |
| Apiaceae | Apium graveolens | 1 | Ag9G01571 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G24301 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0049, Ceq01G0050 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0028 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00003742 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.765 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-17650 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000025l.5 |
| Salicaceae | Populus euphratica | 1 | populus_peu08152 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132638246 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107027833 |