Basic Information
Locus ID:
gene-LOC132638225
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 15208199 | 15209427 | - | gene-LOC132638225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 36,431.48 Da | 47.47 | 85.42 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06606 | STKc_MAPKKK | 2 | 275 | 9.85352E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 5 | 275 | 1.3E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 284 | 5.12E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 297 | 6.5E-64 | - |
| SMART | SM00220 | serkin_6 | 3 | 275 | 1.0E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 3 | 275 | 41.064228 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 9 | 36 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50310.1 | mitogen-activated protein kinase kinase kinase 20. member of MEKK subfamily | 0 |
| RefSeq | XP_019239460.1 | PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Nicotiana attenuata] | 0 |
| Q9SND6 | Mitogen-activated protein kinase kinase kinase 20 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J6JV11 | Mitogen-activated protein kinase kinase kinase npk1 OS=Nicotiana attenuata OX=49451 GN=NPK1_7 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 3 | gene-LOC132637195, gene-LOC132637196, gene-LOC132638225 |
| Solanaceae | Solanum chilense | 4 | SOLCI002050200, SOLCI002549500, SOLCI003126700 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107027802, gene-LOC107027843, gene-LOC114077897 ... |