Basic Information
Locus ID:
gene-LOC132638036
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 462526 | 464007 | - | gene-LOC132638036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 48,737.16 Da | 48.69 | 81.44 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 247 | 292 | 5.6E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 20 | 67 | 1.2E-12 | IPR025610 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 72 | 163 | 7.2E-23 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 246 | 309 | 1.83E-16 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 236 | 308 | 2.5E-16 | IPR036638 |
| SMART | SM00353 | finulus | 249 | 298 | 1.5E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 243 | 292 | 16.107079 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 247 | - | - |
| Coils | Coil | Coil | 282 | 309 | - | - |
| Coils | Coil | Coil | 242 | 262 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_016552541.2 | transcription factor MYC1 [Capsicum annuum] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XJU8 | BHLH domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_00136 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology