Basic Information
Locus ID:
gene-LOC132638022
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 148067775 | 148069061 | + | gene-LOC132638022 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 50,206.32 Da | 54.52 | 85.98 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 86 | 7.06E-6 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 107 | 343 | 1.12E-5 | IPR011043 |
| Gene3D | G3DSA:2.120.10.80 | - | 111 | 352 | 3.5E-5 | IPR015915 |
| SMART | SM00256 | fbox_2 | 17 | 57 | 0.0071 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 110 | 341 | 6.3E-16 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43440.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_015168161.1 | PREDICTED: F-box protein At5g49610-like [Solanum tuberosum] | 0 |
| TrEMBL | M1B1K6 | F-box family protein OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg27685 |
| Solanaceae | Lycium barbarum | 7 | gene-LOC132611547, gene-LOC132611549, gene-LOC132611550 ... |
| Solanaceae | Solanum chilense | 3 | SOLCI002051000, SOLCI002051100, SOLCI002060600 |