halophFGD

Basic Information

Locus ID: gene-LOC132637544

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: vesicle-mediated transport

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	72461306	72464807	-	gene-LOC132637544

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.98	18,159.25 Da	51.42	71.72	-0.74

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03004	Plant transposase (Ptta/En/Spm family)	2	90	4.9E-10	IPR004252
MobiDBLite	mobidb-lite	consensus disorder prediction	117	132	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	114	163	-	-

KEGG Pathway

KO Term:

K20367 (endoplasmic reticulum-Golgi intermediate compartment protein 3)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_019241589.1	PREDICTED: uncharacterized protein LOC109221569 [Nicotiana attenuata]	0
TrEMBL	A0A1U7WXN7	uncharacterized protein LOC104230873 OS=Nicotiana sylvestris OX=4096 GN=LOC104230873 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Solanaceae	Lycium barbarum	52	gene-LOC132601505, gene-LOC132601643, gene-LOC132601653 ... gene-LOC132601785, gene-LOC132603577, gene-LOC132607741, gene-LOC132608134, gene-LOC132608151, gene-LOC132610542, gene-LOC132611375, gene-LOC132611896, gene-LOC132611974, gene-LOC132611976, gene-LOC132612106, gene-LOC132612150, gene-LOC132612244, gene-LOC132612617, gene-LOC132612812, gene-LOC132612904, gene-LOC132613263, gene-LOC132613270, gene-LOC132613271, gene-LOC132613343, gene-LOC132617140, gene-LOC132617789, gene-LOC132618233, gene-LOC132621853, gene-LOC132622253, gene-LOC132624027, gene-LOC132624140, gene-LOC132624299, gene-LOC132624752, gene-LOC132626820, gene-LOC132628619, gene-LOC132629053, gene-LOC132630863, gene-LOC132630934, gene-LOC132631088, gene-LOC132633868, gene-LOC132636148, gene-LOC132636223, gene-LOC132636493, gene-LOC132636727, gene-LOC132637544, gene-LOC132638416, gene-LOC132639278, gene-LOC132639758, gene-LOC132642409, gene-LOC132642500, gene-LOC132643665, gene-LOC132643847, gene-LOC132644038
Solanaceae	Solanum pennellii	3	gene-LOC107009182, gene-LOC107016531, gene-LOC114076118