Basic Information
Locus ID:
gene-LOC132637392
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 34096712 | 34101386 | + | gene-LOC132637392 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 82,121.23 Da | 45.36 | 95.75 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 60 | 4.8E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 208 | 226 | 1.3 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 423 | 701 | 2.7E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 231 | 266 | 9.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 89 | 148 | 1.2E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 313 | 1.19E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 416 | 718 | 7.96E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 501 | 712 | 2.3E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 159 | 230 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 231 | 325 | 7.8E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 383 | 500 | 9.3E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 158 | 1.0E-35 | IPR032675 |
| SMART | SM00220 | serkin_6 | 421 | 680 | 3.6E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 229 | 252 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 253 | 277 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 206 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 135 | 52.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 255 | 278 | 7.273015 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 707 | 36.993637 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 450 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 554 | 566 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 185 | 198 | 4.4E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 253 | 266 | 4.4E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_049378219.1 | receptor-like protein kinase HSL1 [Solanum stenotomum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7HQU0 | Protein kinase domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology