Basic Information
Locus ID:
gene-LOC132636978
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 147890339 | 147894077 | - | gene-LOC132636978 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 66,845.14 Da | 39.98 | 108.76 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 62 | 99 | 9.6E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 229 | 252 | 0.015 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 204 | 227 | 0.0057 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 467 | 489 | 0.11 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 255 | 278 | 0.11 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 546 | 568 | 0.0097 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 163 | 405 | 8.11E-39 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 390 | 619 | 1.2E-32 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 56 | 97 | 9.94E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 243 | 431 | 2.0E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 124 | 242 | 1.6E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 432 | 630 | 2.7E-34 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 520 | 545 | 2.3 | IPR006553 |
| SMART | SM00256 | fbox_2 | 63 | 104 | 1.4E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 572 | 597 | 54.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 467 | 492 | 8.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 362 | 387 | 0.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 230 | 255 | 1.6E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 546 | 570 | 0.0016 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 336 | 361 | 26.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 178 | 203 | 0.28 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 493 | 518 | 0.44 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 441 | 466 | 18.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 256 | 281 | 3.1E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 204 | 229 | 6.9E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 414 | 439 | 610.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 388 | 413 | 9.2 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_006345227.1 | PREDICTED: EIN3-binding F-box protein 1-like [Solanum tuberosum] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | M0ZT63 | EIN3-binding F-box protein 1 OS=Solanum tuberosum OX=4113 GN=102598259 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology