Basic Information
Locus ID:
gene-LOC132636834
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 145336097 | 145341035 | + | gene-LOC132636834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 113,247.35 Da | 36.10 | 99.57 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 698 | 975 | 2.6E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 160 | 219 | 1.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 48 | 84 | 1.8E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 978 | 2.02E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 301 | 613 | 1.04E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 74 | 367 | 1.62E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 304 | 6.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 305 | 636 | 1.4E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 198 | 7.9E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 678 | 775 | 1.0E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 1002 | 2.4E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 374 | 398 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 516 | 540 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 696 | 978 | 9.0E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 564 | 588 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 326 | 350 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 255 | 279 | 3.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 231 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 696 | 999 | 35.580238 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 830 | 842 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 702 | 725 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_015061860.1 | receptor-like protein kinase 5 [Solanum pennellii] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B2C9 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_017745 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology