Basic Information
Locus ID:
gene-LOC132636830
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 145267770 | 145272842 | + | gene-LOC132636830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 111,717.84 Da | 32.86 | 99.51 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 68 | 1.8E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 682 | 959 | 4.9E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 288 | 310 | 1.5 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 962 | 6.2E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 286 | 6.46E-47 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 225 | 574 | 2.59E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 287 | 1.7E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 760 | 987 | 2.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 181 | 4.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 358 | 619 | 5.2E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 356 | 1.9E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 759 | 9.0E-21 | - |
| SMART | SM00369 | LRR_typ_2 | 358 | 382 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 680 | 962 | 6.0E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 5.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 310 | 334 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 983 | 35.665043 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 814 | 826 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 686 | 709 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_004251639.1 | receptor-like protein kinase 5 [Solanum lycopersicum] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B2C9 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_017745 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology