Basic Information
Locus ID:
gene-LOC132636668
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 139967778 | 139971652 | + | gene-LOC132636668 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 11,022.14 Da | 44.99 | 63.13 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 20 | 92 | 1.03727E-48 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 21 | 91 | 1.5E-25 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 8 | 96 | 2.89E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 96 | 4.8E-39 | - |
| SMART | SM00213 | ubq_7 | 21 | 92 | 1.0E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 19 | 96 | 15.296429 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_016541400.2 | small ubiquitin-related modifier 1 [Capsicum annuum] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2X330 | Small ubiquitin-related modifier OS=Capsicum baccatum OX=33114 GN=CQW23_06325 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology