Basic Information
Locus ID:
gene-LOC132636645
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 139277784 | 139280427 | + | gene-LOC132636645 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 86,299.77 Da | 37.48 | 103.65 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 476 | 752 | 5.77084E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 221 | 280 | 2.9E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 472 | 750 | 3.6E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 124 | 146 | 0.36 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 387 | 1.19E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 467 | 752 | 2.56E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 454 | 549 | 1.5E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 550 | 756 | 2.7E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 393 | 8.9E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 185 | 6.9E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 288 | 2.1E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 470 | 757 | 7.8E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 7.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 304 | 328 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 193 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 168 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 470 | 754 | 38.180893 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 604 | 616 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 476 | 499 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_049377473.1 | receptor-like protein kinase 7 isoform X1 [Solanum stenotomum] | 0 |
| Q9FGL5 | Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis thaliana OX=3702 GN=CEPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7HNE6 | Protein kinase domain-containing protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology