Basic Information
Locus ID:
gene-LOC132636593
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 134957904 | 134967722 | - | gene-LOC132636593 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 89,535.18 Da | 43.90 | 95.55 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 203 | 246 | 1.5E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 529 | 800 | 9.9E-41 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 73 | 281 | 1.9E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 499 | 800 | 7.11E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 76 | 302 | 1.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 500 | 603 | 4.0E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 604 | 814 | 5.9E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 526 | 804 | 34.294044 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 235 | 257 | 7.427029 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 233 | 246 | 6.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 212 | 225 | 6.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_006350044.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Solanum tuberosum] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | M1ADB2 | SRF3 OS=Solanum tuberosum OX=4113 GN=102604626 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology