Basic Information
Locus ID:
gene-LOC132636551
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 133148389 | 133158406 | - | gene-LOC132636551 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 50,972.58 Da | 42.37 | 105.29 | 0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 115 | 271 | 9.6E-24 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 305 | 446 | 1.7E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 292 | 449 | 1.5E-16 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 145 | 291 | 6.4E-14 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 100 | 448 | 6.9E-104 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 81 | 447 | 3.9E-125 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_015165300.1 | PREDICTED: vacuolar cation/proton exchanger 3-like [Solanum tuberosum] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1S4C7I3 | Vacuolar cation/proton exchanger OS=Nicotiana tabacum OX=4097 GN=LOC107815956 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology