Basic Information
Locus ID:
gene-LOC132636210
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 108491247 | 108495222 | - | gene-LOC132636210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 70,383.77 Da | 42.67 | 108.80 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 287 | 309 | 1.5 | IPR001611 |
| Pfam | PF00646 | F-box domain | 63 | 107 | 4.6E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 499 | 521 | 0.13 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 582 | 601 | 0.027 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 195 | 437 | 5.49E-36 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 316 | 660 | 6.8E-30 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 60 | 101 | 2.09E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 469 | 664 | 1.1E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 275 | 468 | 5.5E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 274 | 7.4E-25 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 526 | 551 | 19.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 473 | 498 | 0.15 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 261 | 286 | 4.2E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 209 | 234 | 0.0026 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 419 | 444 | 29.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 393 | 418 | 4.9E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 553 | 578 | 4.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 367 | 392 | 0.34 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 235 | 260 | 2.2E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 605 | 630 | 25.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 579 | 603 | 1.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 287 | 312 | 2.4E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 499 | 524 | 0.12 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_009801071.1 | PREDICTED: EIN3-binding F-box protein 1 [Nicotiana sylvestris] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7YGJ9 | EIN3-binding F-box protein 1 OS=Nicotiana sylvestris OX=4096 GN=LOC104246873 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology