Basic Information
Locus ID:
gene-LOC132636207
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 108367630 | 108377461 | + | gene-LOC132636207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 47,974.10 Da | 51.82 | 58.43 | -0.95 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 236 | 319 | 9.6E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 219 | - | - |
| Coils | Coil | Coil | 250 | 280 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_004245024.1 | protein WVD2-like 5 [Solanum lycopersicum] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7HP26 | TPX2 domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology