Basic Information
Locus ID:
gene-LOC132635935
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 41413366 | 41432685 | + | gene-LOC132635935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 59,821.70 Da | 34.95 | 75.89 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 87 | 461 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 289 | 396 | 2.0E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 90 | 238 | 2.2E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 446 | 1.04E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 238 | 9.8E-68 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 172 | 9.8E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 295 | 416 | 6.9E-43 | - |
| SMART | SM00133 | pkinase_C_6 | 397 | 462 | 2.2E-8 | IPR000961 |
| SMART | SM00220 | serkin_6 | 89 | 396 | 1.8E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 89 | 396 | 45.544708 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 397 | 470 | 12.92856 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 95 | 118 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.2 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_049361045.1 | uncharacterized protein LOC125825800 [Solanum verrucosum] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3Q7HQ71 | Serine/threonine-protein kinase tricorner-like OS=Solanum lycopersicum OX=4081 GN=101251015 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology